光诱导的染色质预置使海洋海绵能够快速变态
Light-entrained chromatin priming poises rapid metamorphosis in a marine sponge
海洋海绵 Amphimedon queenslandica 的游泳幼虫在日落光减弱时发生广泛染色质重塑,为附着后的快速变态预先准备基因组。研究整合了跨越幼虫感受态、附着和变态最初数小时的时间分辨转录组与染色质可及性图谱,发现光减弱阶段基因表达变化相对有限,但染色质可及性已大幅改变。被珊瑚藻环境诱导后,变态伴随 AP-1/bZIP 家族等高度保守转录因子的快速瞬时激活,其结合基序富集于差异表达基因附近新开放的调控区。
来源:eLife · doi.org
The most widespread animal life cycle includes a planktonic larval stage that is environmentally induced to settle and rapidly metamorphose into a benthic juvenile. Although this transition is critical for survival, how planetary cues such as light interact with local ecological signals to prepare the genome for such rapid reprogramming remains poorly understood. Here, using the sponge Amphimedon queenslandica , we integrate time-resolved transcriptomic and chromatin accessibility profiling across larval competence, settlement, and the first hours of metamorphosis. We show that diminishing light at sunset is associated with extensive chromatin remodelling in swimming larvae prior to settlement despite relatively modest changes in gene expression. Upon environmental induction by a coralline alga, metamorphosis is accompanied by the rapid and transient activation of a large suite of deeply conserved transcription factors (TFs), including AP-1/bZIP family members, whose binding motifs are enriched in newly accessible regulatory regions near differentially expressed genes. Larvae prevented from experiencing sunset by constant light fail to settle and instead adopt an alternative transcriptional and chromatin state characterised by widespread loss of accessibility and repression of competence-associated TFs, including the circadian regulator CLOCK and other bHLH-PAS factors. These observations support a model in which light-entrained transcriptional activity establishes an anticipatory, permissive chromatin landscape that enables immediate and coordinated transcriptional reprogramming upon environmental induction. We propose that such chromatin priming may represent a broadly deployed regulatory strategy underlying the speed and robustness of metamorphosis in biphasic animal life cycles.