Bits to Binders 竞赛验证并分析 12,000 个 AI 设计的 CAR-T 结合域
Validation and analysis of 12,000 AI-driven CAR-T designs in the Bits to Binders competition
Bits to Binders 全球竞赛以 CAR-T 为场景评估 de novo 结合域设计,来自 42 个国家的团队提交了 12,000 个靶向人 CD20 的 80 氨基酸 minibinder 设计。
来源:Molecular Systems Biology · doi.org
这项竞赛把 1.2 万个 AI 设计的 CAR-T 结合域放进细胞功能筛选,而非只看亲和力,为评估蛋白设计提供了更接近功能的检验方式。
Artificial intelligence (AI) methods for proteins have advanced rapidly, improving structure prediction and design, particularly for de novo binders. However, most evaluations emphasize binding affinity rather than higher-order biological function. We present Bits to Binders , a global competition evaluating de novo binder design in the context of chimeric antigen receptor (CAR) T cells. Teams from 42 countries submitted 12,000 designs of 80-amino acid de novo minibinders targeting human CD20 as CAR binding domains. Designs were screened by pooled CAR-T proliferation, identifying 707 designs exhibiting significant CD20-specific enrichment, with team hit rates from 0.6% to 38.4%. Top-performing candidates were validated as individual constructs, measuring CD20-specific proliferation, expansion, cytokine production, and targeted cell lysis. We identified common design methodologies and factors correlated with DNA synthesis, expression, and target-specific T cell activation which nearly double the success rates when applied as a retrospective filter. We release this dataset as an open resource, with practical recommendations to support more effective AI-driven binder design.